Best way to clean those would be to fill the laundry tub/utility sink with water and add a few ounces of bleach. Submerge as many bottles as you can get in there and let them soak for a day. That will loosen up any stuff in the bottle. Then get yourself a bottle jet and jet them out with hot water. Check all the rims for chips in the glass as they may not seal tightly with a new crown.
After the soaking, I would run them througn the dishwasher on high heat. You can stand them on end on the spikes on the bottom and top shelf in some dishwashers. Just remember to let them cool before you take them out of the DW because they will be HOT!
That is how I clean my bottles for brewing beer.
Tim